2BW3 image
Deposition Date 2005-07-11
Release Date 2005-07-28
Last Version Date 2024-11-13
Entry Detail
PDB ID:
2BW3
Title:
Three-dimensional structure of the Hermes DNA transposase
Biological Source:
Source Organism:
MUSCA DOMESTICA (Taxon ID: 7370)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.00 Å
R-Value Free:
0.21
R-Value Work:
0.18
Space Group:
C 1 2 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:TRANSPOSASE
Mutagens:YES
Chain IDs:A
Chain Length:534
Number of Molecules:1
Biological Source:MUSCA DOMESTICA
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:TRANSPOSASE
Chain IDs:B
Chain Length:84
Number of Molecules:1
Biological Source:MUSCA DOMESTICA
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
MSE A MET SELENOMETHIONINE
Primary Citation
Molecular Architecture of a Eukaryotic DNA Transposase
Nat.Struct.Mol.Biol. 12 715 ? (2005)
PMID: 16041385 DOI: 10.1038/NSMB970

Abstact

Mobile elements and their inactive remnants account for large proportions of most eukaryotic genomes, where they have had central roles in genome evolution. Over 50 years ago, McClintock reported a form of stress-induced genome instability in maize in which discrete DNA segments move between chromosomal locations. Our current mechanistic understanding of enzymes catalyzing transposition is largely limited to prokaryotic transposases. The Hermes transposon from the housefly is part of the eukaryotic hAT superfamily that includes hobo from Drosophila, McClintock's maize Activator and Tam3 from snapdragon. We report here the three-dimensional structure of a functionally active form of the transposase from Hermes at 2.1-A resolution. The Hermes protein has some structural features of prokaryotic transposases, including a domain with a retroviral integrase fold. However, this domain is disrupted by the insertion of an additional domain. Finally, transposition is observed only when Hermes assembles into a hexamer.

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Primary Citation of related structures
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