2BUO image
Deposition Date 2005-06-17
Release Date 2005-07-21
Last Version Date 2023-12-13
Entry Detail
PDB ID:
2BUO
Title:
HIV-1 capsid C-terminal domain in complex with an inhibitor of particle assembly
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.70 Å
R-Value Free:
0.23
R-Value Work:
0.22
R-Value Observed:
0.22
Space Group:
P 41 21 2
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:HIV-1 CAPSID PROTEIN
Chain IDs:A
Chain Length:86
Number of Molecules:1
Biological Source:HUMAN IMMUNODEFICIENCY VIRUS 1
Polymer Type:polypeptide(L)
Molecule:INHIBITOR OF CAPSID ASSEMBLY
Chain IDs:B (auth: T)
Chain Length:12
Number of Molecules:1
Biological Source:SYNTHETIC CONSTRUCT
Ligand Molecules
Primary Citation
The HIV-1 Capsid Protein C-Terminal Domain in Complex with a Virus Assembly Inhibitor
Nat.Struct.Mol.Biol. 12 678 ? (2005)
PMID: 16041386 DOI: 10.1038/NSMB967

Abstact

Immature HIV particles bud from infected cells after assembly at the cytoplasmic side of cellular membranes. This assembly is driven by interactions between Gag polyproteins. Mature particles, each containing a characteristic conical core, are later generated by proteolytic maturation of Gag in the virion. The C-terminal domain of the HIV-1 capsid protein (C-CA) has been shown to contain oligomerization determinants essential for particle assembly. Here we report the 1.7-A-resolution crystal structure of C-CA in complex with a peptide capable of inhibiting immature- and mature-like particle assembly in vitro. The peptide inserts as an amphipathic alpha-helix into a conserved hydrophobic groove of C-CA, resulting in formation of a compact five-helix bundle with altered dimeric interactions. This structure thus reveals the details of an allosteric site in the HIV capsid protein that can be targeted for antiviral therapy.

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Primary Citation of related structures