ISDA

Deposition Date 2005-06-09

Release Date 2006-01-23

Last Version Date 2024-11-13

Entry Detail

PDB ID:

2BUA

Keywords:

HYDROLASE/INHIBITOR

Title:

Crystal Structure Of Porcine Dipeptidyl Peptidase IV (Cd26) in Complex With a Low Molecular Weight Inhibitor.

Biological Source:

Source Organism:

SUS SCROFA (Taxon ID: 9823)

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

2.56 Å

R-Value Free:

0.25

R-Value Work:

0.21

Space Group:

P 1

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Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Molecule:DIPEPTIDYL PEPTIDASE IV
Gene (Uniprot):DPP4
Chain IDs:A, B, C, D
Chain Length:728
Number of Molecules:4
Biological Source:SUS SCROFA

UniProt ID:P22411 Pfam ID:PF18811, PF00930, PF00326 EC:3.4.14.5

Modified Residue

Compound ID	Chain ID	Parent Comp ID	Details	2D Image
ASN	A	ASN	GLYCOSYLATION SITE

Ligand Molecules

007

NAG

SO4

Primary Citation

The reversed binding of beta-phenethylamine inhibitors of DPP-IV: X-ray structures and properties of novel fragment and elaborated inhibitors.

Nordhoff, S, Cerezo-Galvez, S, Feurer, A, Hill, O, Matassa, V.G, Metz, G, Rummey, C, Thiemann, M, Edwards, P.J.Show

Bioorg. Med. Chem. Lett. 16 1744 1748 (2006)

PMID: 16376544 DOI: 10.1016/j.bmcl.2005.11.103

Abstact

The co-crystal structure of beta-phenethylamine fragment inhibitor 5 bound to DPP-IV revealed that the phenyl ring occupied the proline pocket of the enzyme. This finding provided the basis for a general hypothesis of a reverse binding mode for beta-phenethylamine-based DPP-IV inhibitors. Novel inhibitor design concepts that obviate substrate-like structure-activity relationships (SAR) were thereby enabled, and novel, potent inhibitors were discovered.

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Primary Citation of related structures