2BU3 image
Deposition Date 2005-06-08
Release Date 2005-12-14
Last Version Date 2024-11-06
Entry Detail
PDB ID:
2BU3
Keywords:
Title:
Acyl-enzyme intermediate between Alr0975 and glutathione at pH 3.4
Biological Source:
Source Organism:
ANABAENA SP. (Taxon ID: 1167)
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.40 Å
R-Value Free:
0.18
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:ALR0975 PROTEIN
Gene (Uniprot):alr0975
Chain IDs:A, B
Chain Length:254
Number of Molecules:2
Biological Source:ANABAENA SP.
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
MSE A MET SELENOMETHIONINE
Primary Citation
A Papain-Like Enzyme at Work: Native and Acyl- Enzyme Intermediate Structures in Phytochelatin Synthesis.
Proc.Natl.Acad.Sci.USA 102 18848 ? (2005)
PMID: 16339904 DOI: 10.1073/PNAS.0505833102

Abstact

Phytochelatin synthase (PCS) is a key enzyme for heavy-metal detoxification in plants. PCS catalyzes the production of glutathione (GSH)-derived peptides (called phytochelatins or PCs) that bind heavy-metal ions before vacuolar sequestration. The enzyme can also hydrolyze GSH and GS-conjugated xenobiotics. In the cyanobacterium Nostoc, the enzyme (NsPCS) contains only the catalytic domain of the eukaryotic synthase and can act as a GSH hydrolase and weakly as a peptide ligase. The crystal structure of NsPCS in its native form solved at a 2.0-A resolution shows that NsPCS is a dimer that belongs to the papain superfamily of cysteine proteases, with a conserved catalytic machinery. Moreover, the structure of the protein solved as a complex with GSH at a 1.4-A resolution reveals a gamma-glutamyl cysteine acyl-enzyme intermediate stabilized in a cavity of the protein adjacent to a second putative GSH binding site. GSH hydrolase and PCS activities of the enzyme are discussed in the light of both structures.

Legend

Protein

Chemical

Disease

Primary Citation of related structures