2BS4 image
Deposition Date 2005-05-14
Release Date 2005-12-13
Last Version Date 2024-11-20
Entry Detail
PDB ID:
2BS4
Keywords:
Title:
GLU C180 -> ILE VARIANT QUINOL:FUMARATE REDUCTASE FROMWOLINELLA SUCCINOGENES
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
2.76 Å
R-Value Free:
0.21
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:QUINOL-FUMARATE REDUCTASE FLAVOPROTEIN SUBUNIT A
Gene (Uniprot):frdA
Chain IDs:A, D
Chain Length:656
Number of Molecules:2
Biological Source:WOLINELLA SUCCINOGENES
Polymer Type:polypeptide(L)
Molecule:QUINOL-FUMARATE REDUCTASE IRON-SULFUR SUBUNIT B
Gene (Uniprot):frdB
Chain IDs:B, E
Chain Length:239
Number of Molecules:2
Biological Source:WOLINELLA SUCCINOGENES
Polymer Type:polypeptide(L)
Molecule:QUINOL-FUMARATE REDUCTASE DIHEME CYTOCHROME B SUBUNIT C
Gene (Uniprot):frdC
Chain IDs:C, F
Chain Length:256
Number of Molecules:2
Biological Source:WOLINELLA SUCCINOGENES
Primary Citation
Experimental Support for the E-Pathway Hypothesis of Coupled Transmembrane Electron and Proton Transfer in Dihemic Quinol:Fumarate Reductase
Proc.Natl.Acad.Sci.USA 102 18860 ? (2005)
PMID: 16380425 DOI: 10.1073/PNAS.0509711102

Abstact

Reconciliation of apparently contradictory experimental results obtained on the quinol:fumarate reductase, a diheme-containing respiratory membrane protein complex from Wolinella succinogenes, was previously obtained by the proposal of the so-called "E pathway hypothesis." According to this hypothesis, transmembrane electron transfer via the heme groups is strictly coupled to cotransfer of protons via a transiently established pathway thought to contain the side chain of residue Glu-C180 as the most prominent component. Here we demonstrate that, after replacement of Glu-C180 with Gln or Ile by site-directed mutagenesis, the resulting mutants are unable to grow on fumarate, and the membrane-bound variant enzymes lack quinol oxidation activity. Upon solubilization, however, the purified enzymes display approximately 1/10 of the specific quinol oxidation activity of the wild-type enzyme and unchanged quinol Michaelis constants, K(m). The refined x-ray crystal structures at 2.19 A and 2.76 A resolution, respectively, rule out major structural changes to account for these experimental observations. Changes in the oxidation-reduction heme midpoint potential allow the conclusion that deprotonation of Glu-C180 in the wild-type enzyme facilitates the reoxidation of the reduced high-potential heme. Comparison of solvent isotope effects indicates that a rate-limiting proton transfer step in the wild-type enzyme is lost in the Glu-C180 --> Gln variant. The results provide experimental evidence for the validity of the E pathway hypothesis and for a crucial functional role of Glu-C180.

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