2BP5 image
Deposition Date 2005-04-18
Release Date 2005-07-06
Last Version Date 2023-12-13
Entry Detail
PDB ID:
2BP5
Keywords:
Title:
MU2 ADAPTIN SUBUNIT (AP50) OF AP2 ADAPTOR (SECOND DOMAIN), COMPLEXED WITH NON-CANONICAL INTERNALIZATION PEPTIDE VEDYEQGLSG
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.80 Å
R-Value Free:
0.25
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 64
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:CLATHRIN COAT ASSEMBLY PROTEIN AP50
Gene (Uniprot):Ap2m1
Chain IDs:A (auth: M)
Chain Length:435
Number of Molecules:1
Biological Source:RATTUS NORVEGICUS
Polymer Type:polypeptide(L)
Molecule:P2X PURINOCEPTOR 4
Gene (Uniprot):P2rx4
Chain IDs:B (auth: P)
Chain Length:10
Number of Molecules:1
Biological Source:RATTUS NORVEGICUS
Primary Citation
Non-Canonical Yxxg-Phi Endocytic Motifs: Recognition by Ap2 and Preferential Utilization in P2X4 Receptors.
J.Cell.Sci 118 3073 ? (2005)
PMID: 15985462 DOI: 10.1242/JCS.02451

Abstact

During clathrin-mediated endocytosis, proteins on the cell surface are selected for inclusion in clathrin-coated vesicles by clathrin adaptors, mainly the adaptor complex AP2. The P2X4 subtype of ATP-gated ion channel has in its C-terminus two putative endocytic motifs: a canonical YXXPhi motif and a non-canonical YXXGPhi motif (YEQGL). We demonstrate that endocytosis of P2X4 receptors is mediated preferentially by the YXXGPhi motif because the YXXPhi motif is inaccessible to AP2 owing to the structure of the channel. The crystal structure of a complex between residues 160-435 of the mu2 subunit of AP2 and a P2X4 C-terminal peptide showed that the YEQGL motif binds to mu2 at the same site as YXXPhi motifs. Y and Phi residues are accommodated in the same hydrophobic pockets in mu2 with the extra residue between them being accommodated by changes in the peptide's backbone configuration, when compared to YXXPhi motifs. These data demonstrate that the family of potential tyrosine-based endocytic signals must be expanded to include motifs with an additional glycine at Y+3 (YXXGPhi).

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