2BE9 image
Deposition Date 2005-10-23
Release Date 2006-10-31
Last Version Date 2023-08-23
Entry Detail
PDB ID:
2BE9
Keywords:
Title:
Crystal structure of the CTP-liganded (T-State) aspartate transcarbamoylase from the extremely thermophilic archaeon Sulfolobus acidocaldarius
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.60 Å
R-Value Free:
0.27
R-Value Work:
0.22
R-Value Observed:
0.22
Space Group:
P 63 2 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Aspartate carbamoyltransferase
Gene (Uniprot):pyrB
Chain IDs:A
Chain Length:300
Number of Molecules:1
Biological Source:Sulfolobus acidocaldarius
Polymer Type:polypeptide(L)
Molecule:Aspartate carbamoyltransferase regulatory chain
Gene (Uniprot):pyrI
Chain IDs:B
Chain Length:168
Number of Molecules:1
Biological Source:Sulfolobus acidocaldarius
Primary Citation
Crystal structure of Sulfolobus acidocaldarius aspartate carbamoyltransferase in complex with its allosteric activator CTP.
Biochem.Biophys.Res.Commun. 372 40 44 (2008)
PMID: 18477471 DOI: 10.1016/j.bbrc.2008.04.173

Abstact

Aspartate carbamoyltransferase (ATCase) is a paradigm for allosteric regulation of enzyme activity. B-class ATCases display very similar homotropic allosteric behaviour, but differ extensively in their heterotropic patterns. The ATCase from the thermoacidophilic archaeon Sulfolobus acidocaldarius, for example, is strongly activated by its metabolic pathway's end product CTP, in contrast with Escherichia coli ATCase which is inhibited by CTP. To investigate the structural basis of this property, we have solved the crystal structure of the S. acidocaldarius enzyme in complex with CTP. Structure comparison reveals that effector binding does not induce similar large-scale conformational changes as observed for the E. coli ATCase. However, shifts in sedimentation coefficients upon binding of the bi-substrate analogue PALA show the existence of structurally distinct allosteric states. This suggests that the so-called "Nucleotide-Perturbation model" for explaining heterotropic allosteric behaviour, which is based on global conformational strain, is not a general mechanism of B-class ATCases.

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