ISDA

Deposition Date 2005-10-21

Release Date 2005-12-20

Last Version Date 2024-03-13

Entry Detail

PDB ID:

2BE0

Keywords:

RNA/antibiotic

Title:

Complex Between Paromomycin Derivative JS5-39 and the 16S-Rrna A-Site.

Biological Source:

Source Organism:

Streptomyces rimosus subsp. paromomycinus (Taxon ID: 92743)

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

2.63 Å

R-Value Free:

0.26

R-Value Work:

0.22

Space Group:

P 41

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Macromolecular Entities

Polymer Type:polyribonucleotide
Molecule:5'-R(*CP*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*GP*GP*UP*GP*AP*AP*GP*UP*CP*GP*C)-3'
Chain IDs:A, B
Chain Length:22
Number of Molecules:2
Biological Source:Streptomyces rimosus subsp. paromomycinus

Ligand Molecules

JS5

Primary Citation

Antibacterial aminoglycosides with a modified mode of binding to the ribosomal-RNA decoding site

Francois, B, Szychowski, J, Adhikari, S.S, Pachamuthu, K, Swayze, E.E, Griffey, R.H, Migawa, M.T, Westhof, E, Hanessian, S.Show

ANGEW.CHEM.INT.ED.ENGL. 43 6735 6738 (2004)

PMID: 15593140 DOI: 10.1002/anie.200462092

Primary Citation of related structures