2B59 image
Deposition Date 2005-09-27
Release Date 2005-10-11
Last Version Date 2024-02-14
Entry Detail
PDB ID:
2B59
Title:
The type II cohesin dockerin complex
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
2.11 Å
R-Value Free:
0.24
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:COG1196: Chromosome segregation ATPases
Chain IDs:A
Chain Length:187
Number of Molecules:1
Biological Source:Clostridium thermocellum
Polymer Type:polypeptide(L)
Molecule:Cellulosomal scaffolding protein A
Gene (Uniprot):cipA
Chain IDs:B
Chain Length:172
Number of Molecules:1
Biological Source:Clostridium thermocellum
Ligand Molecules
Primary Citation
Mechanism of bacterial cell-surface attachment revealed by the structure of cellulosomal type II cohesin-dockerin complex.
Proc.Natl.Acad.Sci.Usa 103 305 310 (2006)
PMID: 16384918 DOI: 10.1073/pnas.0507109103

Abstact

Bacterial cell-surface attachment of macromolecular complexes maintains the microorganism in close proximity to extracellular substrates and allows for optimal uptake of hydrolytic byproducts. The cellulosome is a large multienzyme complex used by many anaerobic bacteria for the efficient degradation of plant cell-wall polysaccharides. The mechanism of cellulosome retention to the bacterial cell surface involves a calcium-mediated protein-protein interaction between the dockerin (Doc) module from the cellulosomal scaffold and a cohesin (Coh) module of cell-surface proteins located within the proteoglycan layer. Here, we report the structure of an ultra-high-affinity (K(a) = 1.44 x 10(10) M(-1)) complex between type II Doc, together with its neighboring X module from the cellulosome scaffold of Clostridium thermocellum, and a type II Coh module associated with the bacterial cell surface. Identification of X module-Doc and X module-Coh contacts reveal roles for the X module in Doc stability and enhanced Coh recognition. This extremely tight interaction involves one face of the Coh and both helices of the Doc and comprises significant hydrophobic character and a complementary extensive hydrogen-bond network. This structure represents a unique mechanism for cell-surface attachment in anaerobic bacteria and provides a rationale for discriminating between type I and type II Coh modules.

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