2ATP image
Deposition Date 2005-08-25
Release Date 2005-12-27
Last Version Date 2024-10-30
Entry Detail
PDB ID:
2ATP
Keywords:
Title:
Crystal structure of a CD8ab heterodimer
Biological Source:
Source Organism:
Mus musculus (Taxon ID: 10090)
(Taxon ID: )
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.40 Å
R-Value Free:
0.29
R-Value Work:
0.24
R-Value Observed:
0.24
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:T-cell surface glycoprotein CD8 alpha chain
Gene (Uniprot):Cd8a
Chain IDs:A, D (auth: C)
Chain Length:122
Number of Molecules:2
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Molecule:T-cell surface glycoprotein CD8 beta chain
Gene (Uniprot):Cd8b
Chain IDs:C (auth: B), F (auth: D)
Chain Length:115
Number of Molecules:2
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Molecule:artifact linker
Chain IDs:B (auth: E), E (auth: F)
Chain Length:29
Number of Molecules:2
Biological Source:
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
ASN A ASN GLYCOSYLATION SITE
Ligand Molecules
Primary Citation
Structural and Mutational Analyses of a CD8alphabeta Heterodimer and Comparison with the CD8alphaalpha Homodimer.
Immunity 23 661 671 (2005)
PMID: 16356863 DOI: 10.1016/j.immuni.2005.11.002

Abstact

The crystal structure of a recombinant mouse single chain CD8alphabeta ectodomains at 2.4 A resolution reveals paired immunoglobulin variable region-like domains with a striking resemblance to CD8alphaalpha in size, shape, and surface electrostatic potential of complementarity-determining regions (CDR), despite <20% sequence identity between the CD8alpha and CD8beta subunits. Unlike the CD8alpha subunit(s) in the heterodimer or homodimer, the CDR1 loop of CD8beta tilts away from its corresponding CDR2 and CDR3 loops. Consistent with this observation, independent mutational studies reveal that alanine substitutions of residues in the CDR1 loop of CD8beta have no effect on CD8alphabeta coreceptor function, whereas mutations in CD8beta CDR2 and CDR3 loops abolish CD8alphabeta coreceptor activity. The implications of these findings and additional CD8alpha mutational studies for CD8alphabeta- versus CD8alphaalpha-MHCI binding are discussed.

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Primary Citation of related structures