2AS8 image
Entry Detail
PDB ID:
2AS8
Keywords:
Title:
Crystal structure of mature and fully active Der p 1 allergen
Biological Source:
Host Organism:
PDB Version:
Deposition Date:
2005-08-23
Release Date:
2005-12-06
Method Details:
Experimental Method:
Resolution:
1.95 Å
R-Value Free:
0.25
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
P 21 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Major mite fecal allergen Der p 1
Mutations:N52Q
Chain IDs:A, B
Chain Length:222
Number of Molecules:2
Biological Source:Dermatophagoides pteronyssinus
Ligand Molecules
Primary Citation
Three-dimensional structure and IgE-binding properties of mature fully active Der p 1, a clinically relevant major allergen
J.Allergy Clin.Immunol. 117 571 576 (2006)
PMID: 16522455 DOI: 10.1016/j.jaci.2005.11.032

Abstact

BACKGROUND Der p 1 is a 25-kd allergen with cysteine protease activity. Sensitization to Der p 1 affects a large proportion of individuals with allergy, resulting in rhinitis, asthma, and/or atopic dermatitis. OBJECTIVE We determined the Der p 1 crystallographic structure to understand the relationships among structure, function, and allergenicity. METHODS Recombinant pro-Der p 1 was produced in Pichia pastoris and allowed to mature spontaneously before purification by a 2-step procedure. Protease activity was checked by using a fluorogenic peptide substrate. Allergenicity was analysed by IgE binding assays and basophil activation test. The determination of the 3-dimensional structure was obtained by X-ray crystallography at 1.9 A resolution. RESULTS The recombinant protein is fully active and expresses an allergenicity equivalent to its natural counterpart. Der p 1 exhibits a cysteine protease fold typical of the papain family, has a magnesium binding site, and forms dimers with a large interface. The crystal lattice shows that the dimers are tightly packed in a compact double layer of proteins. Such an assembly likely exists in dry fecal pellets, the natural form of allergen exposure, and appears ideal to interact with cell surface and trigger allergic inflammation. CONCLUSION We present here the 3-dimensional structural features of mature fully active Der p 1, one of the main allergens involved in human allergic diseases. This opens the possibility to evaluate the importance of enzymatic activity in pathology and possible new therapeutic interventions.

Legend

Protein

Chemical

Disease

Primary Citation of related structures