2AJF image
Deposition Date 2005-08-01
Release Date 2005-09-20
Last Version Date 2024-12-25
Entry Detail
PDB ID:
2AJF
Title:
Structure of SARS coronavirus spike receptor-binding domain complexed with its receptor
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
SARS coronavirus (Taxon ID: 227859)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.90 Å
R-Value Free:
0.27
R-Value Work:
0.21
R-Value Observed:
0.22
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Angiotensin-converting enzyme-Related Carboxypeptidase (Ace2)
Gene (Uniprot):ACE2
Chain IDs:A, B
Chain Length:597
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:SARS-coronavirus spike protein
Gene (Uniprot):S
Chain IDs:C (auth: E), D (auth: F)
Chain Length:180
Number of Molecules:2
Biological Source:SARS coronavirus
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
ASN A ASN GLYCOSYLATION SITE
Primary Citation
Structure of SARS coronavirus spike receptor-binding domain complexed with receptor.
Science 309 1864 1868 (2005)
PMID: 16166518 DOI: 10.1126/science.1116480

Abstact

The spike protein (S) of SARS coronavirus (SARS-CoV) attaches the virus to its cellular receptor, angiotensin-converting enzyme 2 (ACE2). A defined receptor-binding domain (RBD) on S mediates this interaction. The crystal structure at 2.9 angstrom resolution of the RBD bound with the peptidase domain of human ACE2 shows that the RBD presents a gently concave surface, which cradles the N-terminal lobe of the peptidase. The atomic details at the interface between the two proteins clarify the importance of residue changes that facilitate efficient cross-species infection and human-to-human transmission. The structure of the RBD suggests ways to make truncated disulfide-stabilized RBD variants for use in the design of coronavirus vaccines.

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Primary Citation of related structures