2AHO image
Deposition Date 2005-07-28
Release Date 2006-01-31
Last Version Date 2023-10-25
Entry Detail
PDB ID:
2AHO
Keywords:
Title:
Structure of the archaeal initiation factor eIF2 alpha-gamma heterodimer from Sulfolobus solfataricus complexed with GDPNP
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.00 Å
R-Value Free:
0.29
R-Value Work:
0.22
R-Value Observed:
0.22
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Translation initiation factor 2 gamma subunit
Gene (Uniprot):eif2g
Chain IDs:A
Chain Length:414
Number of Molecules:1
Biological Source:Sulfolobus solfataricus
Polymer Type:polypeptide(L)
Molecule:Translation initiation factor 2 alpha subunit
Gene (Uniprot):eif2a
Chain IDs:B
Chain Length:266
Number of Molecules:1
Biological Source:Sulfolobus solfataricus
Primary Citation
Structural Switch of the gamma Subunit in an Archaeal aIF2alphagamma Heterodimer
Structure 14 119 128 (2006)
PMID: 16407071 DOI: 10.1016/j.str.2005.09.020

Abstact

Eukaryotic and archaeal initiation factors 2 (e/aIF2) are heterotrimeric proteins (alphabetagamma) supplying the small subunit of the ribosome with methionylated initiator tRNA. This study reports the crystallographic structure of an aIF2alphagamma heterodimer from Sulfolobus solfataricus bound to Gpp(NH)p-Mg(2+). aIF2gamma is in a closed conformation with the G domain packed on domains II and III. The C-terminal domain of aIF2alpha interacts with domain II of aIF2gamma. Conformations of the two switch regions involved in GTP binding are similar to those encountered in an EF1A:GTP:Phe-tRNA(Phe) complex. Comparison with the EF1A structure suggests that only the gamma subunit of the aIF2alphagamma heterodimer contacts tRNA. Because the alpha subunit markedly reinforces the affinity of tRNA for the gamma subunit, a contribution of the alpha subunit to the switch movements observed in the gamma structure is considered.

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