2AGH image
Deposition Date 2005-07-26
Release Date 2005-11-22
Last Version Date 2024-05-01
Entry Detail
PDB ID:
2AGH
Keywords:
Title:
Structural basis for cooperative transcription factor binding to the CBP coactivator
Biological Source:
Source Organism:
Mus musculus (Taxon ID: 10090)
Homo sapiens (Taxon ID: 9606)
Method Details:
Experimental Method:
Conformers Calculated:
100
Conformers Submitted:
20
Selection Criteria:
lowest energy and lowest distance and angle violations
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Myb proto-oncogene protein
Gene (Uniprot):Myb
Chain IDs:A
Chain Length:25
Number of Molecules:1
Biological Source:Mus musculus
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Crebbp protein
Gene (Uniprot):Crebbp
Chain IDs:B
Chain Length:87
Number of Molecules:1
Biological Source:Mus musculus
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Zinc finger protein HRX
Gene (Uniprot):KMT2A
Chain IDs:C
Chain Length:31
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Structural Basis for Cooperative Transcription Factor Binding to the CBP Coactivator
J.Mol.Biol. 355 1005 1013 (2006)
PMID: 16253272 DOI: 10.1016/j.jmb.2005.09.059

Abstact

Regulation of transcription requires interactions between transcriptional activators and transcriptional co-activator CREB binding protein (CBP). The KIX domain of CBP can bind simultaneously to two different proteins, providing an additional mechanism for transcriptional regulation. Here we describe the solution structure of the ternary complex formed by cooperative binding of activation domains from the c-Myb and mixed lineage leukemia (MLL) transcription factors to the KIX domain. The MLL and c-Myb domains form helices that bind to two distinct hydrophobic grooves on opposite faces of KIX. Compared to the binary KIX:c-Myb complex, significant changes are observed in the structure of KIX at the MLL binding interface in the ternary complex. Two regions of KIX that are disordered in the binary complex become structured in the ternary complex: a flexible loop forms intimate contacts with bound MLL, and the C-terminal helix is extended and stabilized by MLL binding. This structural change results in the formation of additional electrostatic/polar interactions between KIX and the bound c-Myb, providing a structural basis for the cooperativity observed for the ternary complex.

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