2A5S image
Deposition Date 2005-06-30
Release Date 2005-11-15
Last Version Date 2024-10-30
Entry Detail
PDB ID:
2A5S
Title:
Crystal Structure Of The NR2A Ligand Binding Core In Complex With Glutamate
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.70 Å
R-Value Free:
0.22
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 41 21 2
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:N-methyl-D-aspartate receptor NMDAR2A subunit
Gene (Uniprot):Grin2a
Chain IDs:A
Chain Length:284
Number of Molecules:1
Biological Source:Rattus norvegicus
Ligand Molecules
Primary Citation
Subunit arrangement and function in NMDA receptors
Nature 438 185 192 (2005)
PMID: 16281028 DOI: 10.1038/nature04089

Abstact

Excitatory neurotransmission mediated by NMDA (N-methyl-D-aspartate) receptors is fundamental to the physiology of the mammalian central nervous system. These receptors are heteromeric ion channels that for activation require binding of glycine and glutamate to the NR1 and NR2 subunits, respectively. NMDA receptor function is characterized by slow channel opening and deactivation, and the resulting influx of cations initiates signal transduction cascades that are crucial to higher functions including learning and memory. Here we report crystal structures of the ligand-binding core of NR2A with glutamate and that of the NR1-NR2A heterodimer with glutamate and glycine. The NR2A-glutamate complex defines the determinants of glutamate and NMDA recognition, and the NR1-NR2A heterodimer suggests a mechanism for ligand-induced ion channel opening. Analysis of the heterodimer interface, together with biochemical and electrophysiological experiments, confirms that the NR1-NR2A heterodimer is the functional unit in tetrameric NMDA receptors and that tyrosine 535 of NR1, located in the subunit interface, modulates the rate of ion channel deactivation.

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Primary Citation of related structures