1qqp image
Deposition Date 1999-05-20
Release Date 1999-06-18
Last Version Date 2024-11-13
Entry Detail
PDB ID:
1QQP
Keywords:
Title:
FOOT-AND-MOUTH DISEASE VIRUS/ OLIGOSACCHARIDE RECEPTOR COMPLEX.
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
1.90 Å
R-Value Work:
0.16
R-Value Observed:
0.16
Space Group:
I 2 3
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:PROTEIN (GENOME POLYPROTEIN)
Chain IDs:A (auth: 1)
Chain Length:213
Number of Molecules:1
Biological Source:Foot-and-mouth disease virus
Polymer Type:polypeptide(L)
Molecule:PROTEIN (GENOME POLYPROTEIN)
Chain IDs:B (auth: 2)
Chain Length:218
Number of Molecules:1
Biological Source:Foot-and-mouth disease virus
Polymer Type:polypeptide(L)
Molecule:PROTEIN (GENOME POLYPROTEIN)
Chain IDs:C (auth: 3)
Chain Length:220
Number of Molecules:1
Biological Source:Foot-and-mouth disease virus
Polymer Type:polypeptide(L)
Molecule:PROTEIN (GENOME POLYPROTEIN)
Chain IDs:D (auth: 4)
Chain Length:85
Number of Molecules:1
Biological Source:Foot-and-mouth disease virus
Primary Citation
The structure and function of a foot-and-mouth disease virus-oligosaccharide receptor complex.
EMBO J. 18 543 554 (1999)
PMID: 9927414 DOI: 10.1093/emboj/18.3.543

Abstact

Heparan sulfate has an important role in cell entry by foot-and-mouth disease virus (FMDV). We find that subtype O1 FMDV binds this glycosaminoglycan with a high affinity by immobilizing a specific highly abundant motif of sulfated sugars. The binding site is a shallow depression on the virion surface, located at the junction of the three major capsid proteins, VP1, VP2 and VP3. Two pre-formed sulfate-binding sites control receptor specificity. Residue 56 of VP3, an arginine in this virus, is critical to this recognition, forming a key component of both sites. This residue is a histidine in field isolates of the virus, switching to an arginine in adaptation to tissue culture, forming the high affinity heparan sulfate-binding site. We postulate that this site is a conserved feature of FMDVs, such that in the infected animal there is a biological advantage to low affinity, or more selective, interactions with glycosaminoglycan receptors.

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Primary Citation of related structures