1jf9 image
Deposition Date 2001-06-20
Release Date 2001-07-04
Last Version Date 2025-03-26
Entry Detail
PDB ID:
1JF9
Keywords:
Title:
Crystal Structure of selenocysteine lyase
Biological Source:
Source Organism:
Escherichia coli (Taxon ID: 562)
Method Details:
Experimental Method:
Resolution:
2.00 Å
R-Value Free:
0.20
R-Value Work:
0.17
Space Group:
P 43 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:SELENOCYSTEINE LYASE
Gene (Uniprot):sufS
Chain IDs:A
Chain Length:408
Number of Molecules:1
Biological Source:Escherichia coli
Ligand Molecules
Primary Citation
Analysis of the E. coli NifS CsdB Protein at 2.0A Reveals the Structural Basis for Perselenide and Persulfide Intermediate Formation
J.Mol.Biol. 315 1199 1208 (2002)
PMID: 11827487 DOI: 10.1006/jmbi.2001.5308

Abstact

The Escherichia coli NifS CsdB protein is a member of the homodimeric pyridoxal 5'-phosphate (PLP)-dependent family of enzymes. These enzymes are capable of decomposing cysteine or selenocysteine into L-alanine and sulfur or selenium, respectively. E. coli NifS CsdB has a high specificity for L-selenocysteine in comparison to l-cysteine, suggesting a role for this enzyme is selenium metabolism. The 2.0 A crystal structure of E. coli NifS CsdB reveals a high-resolution view of the active site of this enzyme in apo-, persulfide, perselenide, and selenocysteine-bound intermediates, suggesting a mechanism for the stabilization of the enzyme persulfide and perselenide intermediates during catalysis, a necessary intermediate in the formation of sulfur and selenium containing metabolites.

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Primary Citation of related structures