1ZTQ image
Deposition Date 2005-05-27
Release Date 2006-05-30
Last Version Date 2024-02-14
Entry Detail
PDB ID:
1ZTQ
Keywords:
HYDROLASE
Title:
Crystal structure of the catalytic domain of MMP-13 complexed with WAY-033
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Escherichia coli BL21(DE3)
Method Details:
Experimental Method:
X-RAY DIFFRACTION
Resolution:
2.00 Å
R-Value Free:
0.28
R-Value Work:
0.23
R-Value Observed:
0.23
Space Group:
P 1 21 1
1ZTQ validation report
Macromolecular Entities
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Collagenase 3
Gene (Uniprot):MMP13
Chain IDs:A, B, C, D
Chain Length:165
Number of Molecules:4
Biological Source:Homo sapiens
UniProt ID:P45452 Pfam ID:PF00413 EC:3.4.24.17
Ligand Molecules
033
CA
ZN
Primary Citation
Identification of potent and selective MMP-13 inhibitors
Bioorg.Med.Chem.Lett. 15 4105 4109 (2005)
PMID: 16005220 DOI: 10.1016/j.bmcl.2005.06.019

Abstact

A potent, selective series of MMP-13 inhibitors has been derived from a weak (3.2 microM) inhibitor that did not bear a zinc chelator. Structure-based drug design strategies were employed to append a Zn-chelating group to one end of the molecule and functionality to enhance selectivity to the other. A compound from this series demonstrated rat oral bioavailability and efficacy in a bovine articular cartilage explant model.

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Primary Citation of related structures
1ZTQ