1ZNL image
Entry Detail
PDB ID:
1ZNL
Title:
Strong Solute-Solute Dispersive Interactions in a Protein-Ligand Complex
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2005-05-11
Release Date:
2005-12-20
Method Details:
Experimental Method:
Resolution:
1.70 Å
R-Value Free:
0.22
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 43 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Major Urinary Protein
Chain IDs:A
Chain Length:174
Number of Molecules:1
Biological Source:Mus musculus
Primary Citation
Strong Solute-Solute Dispersive Interactions in a Protein-Ligand Complex.
J.Am.Chem.Soc. 127 17061 17067 (2005)
PMID: 16316253 DOI: 10.1021/ja055454g

Abstact

The contributions of solute-solute dispersion interactions to binding thermodynamics have generally been thought to be small, due to the surmised equality between solute-solvent dispersion interactions prior to the interaction versus solute-solute dispersion interactions following the interaction. The thermodynamics of binding of primary alcohols to the major urinary protein (MUP-I) indicate that this general assumption is not justified. The enthalpy of binding becomes more favorable with increasing chain length, whereas the entropy of binding becomes less favorable, both parameters showing a linear dependence. Despite the hydrophobicity of the interacting species, these data show that binding is not dominated by the classical hydrophobic effect, but can be attributed to favorable ligand-protein dispersion interactions.

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