1ZBJ image
Deposition Date 2005-04-08
Release Date 2005-05-03
Last Version Date 2024-05-22
Entry Detail
PDB ID:
1ZBJ
Keywords:
Title:
Inferential Structure Determination of the Fyn SH3 domain using NOESY data from a 15N,H2 enriched protein
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Conformers Calculated:
10000
Conformers Submitted:
20
Selection Criteria:
High posterior probability structures
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Proto-oncogene tyrosine-protein kinase FYN
Gene (Uniprot):FYN
Chain IDs:A
Chain Length:59
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Inferential Structure Determination
Science 309 303 306 (2005)
PMID: 16002620 DOI: 10.1126/science.1110428

Abstact

Macromolecular structures calculated from nuclear magnetic resonance data are not fully determined by experimental data but depend on subjective choices in data treatment and parameter settings. This makes it difficult to objectively judge the precision of the structures. We used Bayesian inference to derive a probability distribution that represents the unknown structure and its precision. This probability distribution also determines additional unknowns, such as theory parameters, that previously had to be chosen empirically. We implemented this approach by using Markov chain Monte Carlo techniques. Our method provides an objective figure of merit and improves structural quality.

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Primary Citation of related structures