1Z7Z image
Deposition Date 2005-03-28
Release Date 2005-08-02
Last Version Date 2024-12-25
Entry Detail
PDB ID:
1Z7Z
Keywords:
Title:
Cryo-em structure of human coxsackievirus A21 complexed with five domain icam-1kilifi
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
8.00 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:human coxsackievirus A21
Chain IDs:A (auth: 1)
Chain Length:286
Number of Molecules:1
Biological Source:Human coxsackievirus A21
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:human coxsackievirus A21
Chain IDs:B (auth: 2)
Chain Length:272
Number of Molecules:1
Biological Source:Human coxsackievirus A21
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:human coxsackievirus A21
Chain IDs:C (auth: 3)
Chain Length:234
Number of Molecules:1
Biological Source:Human coxsackievirus A21
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:human coxsackievirus A21
Chain IDs:D (auth: 4)
Chain Length:12
Number of Molecules:1
Biological Source:Human coxsackievirus A21
Polymer Type:polypeptide(L)
Molecule:human coxsackievirus A21
Chain IDs:E (auth: 5)
Chain Length:6
Number of Molecules:1
Biological Source:Human coxsackievirus A21
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Intercellular adhesion molecule-1
Gene (Uniprot):ICAM1
Mutagens:K29M
Chain IDs:F (auth: I)
Chain Length:450
Number of Molecules:1
Biological Source:Homo sapiens
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
ASN F ASN GLYCOSYLATION SITE
Ligand Molecules
Primary Citation
The crystal structure of coxsackievirus a21 and its interaction with icam-1.
Structure 13 1019 1033 (2005)
PMID: 16004874 DOI: 10.1016/j.str.2005.04.011

Abstact

CVA21 and polioviruses both belong to the Enterovirus genus in the family of Picornaviridae, whereas rhinoviruses form a distinct picornavirus genus. Nevertheless, CVA21 and the major group of human rhinoviruses recognize intercellular adhesion molecule-1 (ICAM-1) as their cellular receptor, whereas polioviruses use poliovirus receptor. The crystal structure of CVA21 has been determined to 3.2 A resolution. Its structure has greater similarity to poliovirus structures than to other known picornavirus structures. Cryo-electron microscopy (cryo-EM) was used to determine an 8.0 A resolution structure of CVA21 complexed with an ICAM-1 variant, ICAM-1(Kilifi). The cryo-EM map was fitted with the crystal structures of ICAM-1 and CVA21. Significant differences in the structure of CVA21 with respect to the poliovirus structures account for the inability of ICAM-1 to bind polioviruses. The interface between CVA21 and ICAM-1 has shape and electrostatic complementarity with many residues being conserved among those CVAs that bind ICAM-1.

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Protein

Chemical

Disease

Primary Citation of related structures