1Z66 image
Deposition Date 2005-03-21
Release Date 2006-03-28
Last Version Date 2024-11-13
Entry Detail
PDB ID:
1Z66
Keywords:
Title:
NMR solution structure of domain III of E-protein of tick-borne Langat flavivirus (no RDC restraints)
Biological Source:
Source Organism:
Langat virus (Taxon ID: 11085)
Host Organism:
Method Details:
Experimental Method:
Conformers Calculated:
500
Conformers Submitted:
20
Selection Criteria:
structures with the lowest energy
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Major envelope protein E
Chain IDs:A
Chain Length:96
Number of Molecules:1
Biological Source:Langat virus
Ligand Molecules
Primary Citation
NMR solution structure and backbone dynamics of domain III of the E protein of tick-borne Langat flavivirus suggests a potential site for molecular recognition.
Protein Sci. 15 1342 1355 (2006)
PMID: 16731969 DOI: 10.1110/ps.051844006

Abstact

Flaviviruses cause many human diseases, including dengue fever, yellow fever, West Nile viral encephalitis, and hemorrhagic fevers, and are transmitted to their vertebrate hosts by infected mosquitoes and ticks. Domain III of the envelope protein (E-D3) is considered to be the primary viral determinant involved in the virus-host-cell receptor interaction, and thus represents an excellent target for antiviral drug development. Langat (LGT) virus is a naturally attenuated BSL-2 TBE virus and is a model for the pathogenic BSL-3 and BSL-4 viruses in the serogroup. We have determined the solution structure of LGT-E-D3 using heteronuclear NMR spectroscopy. The backbone dynamics of LGT-E-D3 have been investigated using 15N relaxation measurements. A detailed analysis of the solution structure and dynamics of LGT-E-D3 suggests potential residues that could form a surface for molecular recognition, and thereby represent a target site for antiviral therapeutics design.

Legend

Protein

Chemical

Disease

Primary Citation of related structures