1Z1Z image
Deposition Date 2005-03-07
Release Date 2006-04-18
Last Version Date 2024-05-22
Entry Detail
PDB ID:
1Z1Z
Keywords:
Title:
NMR structure of the gpu tail protein from lambda bacteriophage
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Conformers Submitted:
1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Minor tail protein U
Gene (Uniprot):U
Chain IDs:A
Chain Length:131
Number of Molecules:1
Biological Source:Enterobacteria phage lambda
Ligand Molecules
Primary Citation
The NMR structure of the gpU tail-terminator protein from bacteriophage lambda: identification of sites contributing to Mg(II)-mediated oligomerization and biological function.
J.Mol.Biol. 365 175 186 (2007)
PMID: 17056065 DOI: 10.1016/j.jmb.2006.09.068

Abstact

During the late stages of lambda bacteriophage assembly, the protein gpU terminates tail polymerization and participates at the interface between the mature capsid and tail components. When it engages the lambda tail, gpU undergoes a monomer-hexamer transition to achieve its biologically active form. Towards understanding how gpU participates in multiple protein-protein interactions, we have solved the structure of gpU in its monomeric state using NMR methods. The structure reveals a mixed alpha/beta motif with several dynamic loops at the periphery. Addition of 20 mM MgCl(2) is known to oligomerize gpU in the absence of its protein partners. Multiple image analysis of electron micrographs revealed ring-like structures of magnesium ion saturated gpU with a 30 A pore, consistent with its function as a portal for the passage of viral DNA into the host bacterium. The ability of magnesium ions to promote oligomerization was lost when substitutions were made at a cluster of acidic amino acids in the vicinity of helix alpha2 and the beta1-beta2 loop. Furthermore, substitutions at these sites abolished the biological activity of gpU.

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Primary Citation of related structures
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