1YTF image
Deposition Date 1996-04-05
Release Date 1996-06-20
Last Version Date 2024-02-14
Entry Detail
PDB ID:
1YTF
Keywords:
TRANSCRIPTION/DNA
Title:
YEAST TFIIA/TBP/DNA COMPLEX
Biological Source:
Source Organism:
Saccharomyces cerevisiae (Taxon ID: 4932)
Host Organism:
Escherichia coli
Method Details:
Experimental Method:
X-RAY DIFFRACTION
Resolution:
2.50 Å
R-Value Free:
0.29
R-Value Work:
0.23
R-Value Observed:
0.23
Space Group:
P 21 21 21
1YTF validation report
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:PROTEIN (TATA BINDING PROTEIN (TBP))
Gene (Uniprot):SPT15
Chain IDs:C (auth: A)
Chain Length:180
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae
UniProt ID:P13393 Pfam ID:PF00352
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:PROTEIN (TRANSCRIPTION FACTOR IIA - TOA1N SUBUNIT)
Gene (Uniprot):TOA1
Chain IDs:D (auth: B)
Chain Length:53
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae
UniProt ID:P32773 Pfam ID:PF03153
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:PROTEIN (TRANSCRIPTION FACTOR IIA - TOA1C SUBUNIT)
Gene (Uniprot):TOA1
Chain IDs:E (auth: C)
Chain Length:79
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae
UniProt ID:P32773 Pfam ID:PF03153
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:PROTEIN (TRANSCRIPTION FACTOR IIA - TOA2 SUBUNIT)
Gene (Uniprot):TOA2
Chain IDs:F (auth: D)
Chain Length:121
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae
UniProt ID:P32774 Pfam ID:PF02268, PF02751
Ligand Molecules
NA
Primary Citation
Crystal structure of a yeast TFIIA/TBP/DNA complex.
Nature 381 127 134 (1996)
PMID: 8610010 DOI: 10.1038/381127a0

Abstact

The X-ray crystal structure of the transcription factor IIA (TFIIA) in complex with the TATA-box-binding protein (TBP) and TATA-element DNA is presented at 2.5 A resolution. TFIIA is composed of a beta-barrel and a four-helix bundle motif that together have a boot-like appearance. The beta-barrel extends the TBP beta-sheet and bridges over the DNA major groove immediately upstream of the TATA box. The four-helix bundle contributes substantially to the surface of the complex available for interaction with additional transcription factors.

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Disease

Primary Citation of related structures
1YTF