1YS5 image
Deposition Date 2005-02-07
Release Date 2006-02-07
Last Version Date 2024-05-29
Entry Detail
PDB ID:
1YS5
Title:
Solution structure of the antigenic domain of GNA1870 of Neisseria meningitidis
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Conformers Calculated:
400
Conformers Submitted:
30
Selection Criteria:
target function
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:lipoprotein
Chain IDs:A
Chain Length:164
Number of Molecules:1
Biological Source:Neisseria meningitidis
Ligand Molecules
Primary Citation
Solution structure of the immunodominant domain of protective antigen GNA1870 of Neisseria meningitidis
J.Biol.Chem. 281 7220 7227 (2006)
PMID: 16407174 DOI: 10.1074/jbc.M508595200

Abstact

GNA1870, a 28-kDa surface-exposed lipoprotein of Neisseria meningitidis recently discovered by reverse vaccinology, is one of the most potent antigens of Meningococcus and a promising candidate for a universal vaccine against a devastating disease. Previous studies of epitope mapping and genetic characterization identified residues critical for bactericidal response within the C-terminal domain of the molecule. To elucidate the conformation of protective epitopes, we used NMR spectroscopy to obtain the solution structure of the immunodominant 18-kDa C-terminal portion of GNA1870. The structure consists of an eight-stranded antiparallel beta-barrel overlaid by a short alpha-helix with an unstructured N-terminal end. Residues previously shown to be important for antibody recognition were mapped on loops facing the same ridge of the molecule. The sequence similarity of GNA1870 with members of the bacterial transferrin receptor family allows one to predict the folding of this class of well known bacterial antigens, providing the basis for the rational engineering of high affinity B cell epitopes.

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Primary Citation of related structures