1YR1 image
Deposition Date 2005-02-02
Release Date 2006-02-07
Last Version Date 2024-05-01
Entry Detail
PDB ID:
1YR1
Keywords:
Title:
Structure of the major extracytoplasmic domain of the trans isomer of the bacterial cell division protein divib from geobacillus stearothermophilus
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Conformers Calculated:
60
Conformers Submitted:
25
Selection Criteria:
lowest energy
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:cell-division initiation protein
Chain IDs:A
Chain Length:119
Number of Molecules:1
Biological Source:Geobacillus stearothermophilus
Ligand Molecules
Primary Citation
Domain architecture and structure of the bacterial cell division protein DivIB.
Proc.Natl.Acad.Sci.USA 103 6700 6705 (2006)
PMID: 16618922 DOI: 10.1073/pnas.0601397103

Abstact

Bacterial cytokinesis requires the coordinated assembly of a complex of proteins, collectively known as the divisome, at the incipient division site. DivIB/FtsQ is a conserved component of the divisome in bacteria with cell walls, suggesting that it plays a role in synthesis and/or remodeling of septal peptidoglycan. We demonstrate that the extracytoplasmic region of DivIB comprises three discrete domains that we designate alpha, beta, and gamma from the N to C terminus. The alpha-domain is proximal to the cytoplasmic membrane and coincident with the polypeptide transport-associated domain that was proposed previously to function as a molecular chaperone. The beta-domain has a unique 3D fold, with no eukaryotic counterpart, and we show that it interconverts between two discrete conformations via cis-trans isomerization of a Tyr-Pro peptide bond. We propose that this isomerization might modulate protein-protein interactions of the flanking alpha- and gamma-domains. The C-terminal gamma-domain is unstructured in the absence of other divisomal proteins, but we show that it is critical for DivIB function.

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Primary Citation of related structures