1YPY image
Deposition Date 2005-01-31
Release Date 2005-03-01
Last Version Date 2024-10-09
Entry Detail
PDB ID:
1YPY
Keywords:
Title:
Crystal Structure of Vaccinia Virus L1 protein
Biological Source:
Source Organism:
Vaccinia virus (Taxon ID: 10245)
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.51 Å
R-Value Free:
0.24
R-Value Work:
0.23
R-Value Observed:
0.23
Space Group:
C 1 2 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Virion membrane protein
Gene (Uniprot):OPG099
Chain IDs:A, B
Chain Length:184
Number of Molecules:2
Biological Source:Vaccinia virus
Primary Citation
The 1.51-Angstrom structure of the poxvirus L1 protein, a target of potent neutralizing antibodies.
Proc.Natl.Acad.Sci.Usa 102 4240 4245 (2005)
PMID: 15761054 DOI: 10.1073/pnas.0501103102

Abstact

Although eradicated from nature more than two decades ago, the threat of smallpox has reemerged because of concerns over its use as a biological weapon. We present the structure of the poxvirus L1 protein, a molecule that is conserved throughout the poxvirus family and is nearly identical in vaccinia virus and in variola virus, which causes smallpox. L1 is a myristoylated envelope protein that is a potent target for neutralizing antibodies and an important component of current experimental vaccines. The L1 structure reveals a hydrophobic cavity located adjacent to its N terminus. The cavity would be capable of shielding the myristate moiety, which is essential for virion assembly. The structure of L1 is a step in the elucidation of molecular mechanisms common to all poxviruses that may stimulate the design of safer vaccines and new antipoxvirus drugs.

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