1YP8 image
Deposition Date 2005-01-30
Release Date 2005-05-24
Last Version Date 2024-10-09
Entry Detail
PDB ID:
1YP8
Keywords:
Title:
Solution structure of the cyclotide tricyclon A
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Conformers Calculated:
50
Conformers Submitted:
20
Selection Criteria:
structures with the lowest energy
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:tricyclon A
Chain IDs:A
Chain Length:33
Number of Molecules:1
Biological Source:Viola tricolor
Ligand Molecules
Primary Citation
Processing of a 22 kDa precursor protein to produce the circular protein tricyclon A.
Structure 13 691 701 (2005)
PMID: 15893660 DOI: 10.1016/j.str.2005.02.013

Abstact

Cyclotides are a family of plant proteins that have the unusual combination of head-to-tail backbone cyclization and a cystine knot motif. They are exceptionally stable and show resistance to most chemical, physical, and enzymatic treatments. The structure of tricyclon A, a previously unreported cyclotide, is described here. In this structure, a loop that is disordered in other cyclotides forms a beta sheet that protrudes from the globular core. This study indicates that the cyclotide fold is amenable to the introduction of a range of structural elements without affecting the cystine knot core of the protein, which is essential for the stability of the cyclotides. Tricyclon A does not possess a hydrophobic patch, typical of other cyclotides, and has minimal hemolytic activity, making it suitable for pharmaceutical applications. The 22 kDa precursor protein of tricyclon A was identified and provides clues to the processing of these fascinating miniproteins.

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