1YP0 image
Deposition Date 2005-01-28
Release Date 2005-04-19
Last Version Date 2024-02-14
Entry Detail
PDB ID:
1YP0
Keywords:
Title:
Structure of the steroidogenic factor-1 ligand binding domain bound to phospholipid and a SHP peptide motif
Biological Source:
Source Organism:
Mus musculus (Taxon ID: 10090)
Method Details:
Experimental Method:
Resolution:
1.50 Å
R-Value Free:
0.23
R-Value Work:
0.22
R-Value Observed:
0.22
Space Group:
P 41 21 2
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:nuclear receptor subfamily 5, group A, member 1
Gene (Uniprot):Nr5a1
Chain IDs:A
Chain Length:239
Number of Molecules:1
Biological Source:Mus musculus
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Nuclear receptor subfamily 0, group B, member 2
Gene (Uniprot):Nr0b2
Chain IDs:B
Chain Length:12
Number of Molecules:1
Biological Source:
Ligand Molecules
Primary Citation
Crystallographic identification and functional characterization of phospholipids as ligands for the orphan nuclear receptor steroidogenic factor-1.
Mol.Cell 17 491 502 (2005)
PMID: 15721253 DOI: 10.1016/j.molcel.2005.02.002

Abstact

The orphan nuclear receptor steroidogenic factor 1 (SF-1) regulates the differentiation and function of endocrine glands. Although SF-1 is constitutively active in cell-based assays, it is not known whether this transcriptional activity is modulated by ligands. Here, we describe the 1.5 angstroms crystal structure of the SF-1 ligand binding domain in complex with an LXXLL motif from a coregulator protein. The structure reveals the presence of a phospholipid ligand in a surprisingly large pocket (approximately 1600 angstroms3), with the receptor adopting the canonical active conformation. The bound phospholipid is readily exchanged and modulates SF-1 interactions with coactivators. Mutations designed to reduce the size of the SF-1 pocket or to disrupt hydrogen bonds with the phospholipid abolish SF-1/coactivator interactions and significantly reduce SF-1 transcriptional activity. These findings provide evidence that SF-1 is regulated by endogenous ligands and suggest an unexpected relationship between phospholipids and endocrine development and function.

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