1YNY image
Deposition Date 2005-01-26
Release Date 2005-03-01
Last Version Date 2023-08-23
Entry Detail
PDB ID:
1YNY
Keywords:
Title:
Molecular Structure of D-Hydantoinase from a Bacillus sp. AR9: Evidence for mercury inhibition
Biological Source:
Source Organism:
Bacillus sp. (Taxon ID: 301298)
Method Details:
Experimental Method:
Resolution:
2.30 Å
R-Value Free:
0.24
R-Value Work:
0.19
Space Group:
P 64
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:D-Hydantoinase
Chain IDs:A, B
Chain Length:461
Number of Molecules:2
Biological Source:Bacillus sp.
Ligand Molecules
Primary Citation
Molecular structure of D-hydantoinase from Bacillus sp. AR9: evidence for mercury inhibition.
J.Mol.Biol. 347 95 105 (2005)
PMID: 15733920 DOI: 10.1016/j.jmb.2005.01.025

Abstact

Stereospecific conversion of hydantoins into their carbamoyl acid derivatives could be achieved by using the enzyme hydantoinase. Specific hydantoinases convert either the D-form or the L-form of the hydantoin and the amino acids responsible for stereospecificity have not been identified. Structural studies on hydantoinases from a few bacterial species were published recently. The structure of a thermostable D-hydantoinase from Bacillus sp. AR9 (bar9HYD) was solved to 2.3 angstroms resolution. The usual modification of carboxylation of the active-site residue Lys150 did not happen in bar9HYD. Two manganese ions were modelled in the active site. Through biochemical studies, it was shown that mercury inhibits the activity of the enzyme. The mercury derivative provided some information about the binding site of the mercuric inhibitors and a possible reason for inhibition is presented.

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Primary Citation of related structures