1YMP image
Deposition Date 2005-01-21
Release Date 2005-05-10
Last Version Date 2023-08-23
Entry Detail
PDB ID:
1YMP
Keywords:
Title:
The Crystal Structure of a Partial Mouse Notch-1 Ankyrin Domain: Repeats 4 Through 7 Preserve an Ankyrin Fold
Biological Source:
Source Organism:
Mus musculus (Taxon ID: 10090)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.20 Å
R-Value Free:
0.30
R-Value Work:
0.20
Space Group:
P 31
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Notch 1 protein
Chain IDs:A, B
Chain Length:135
Number of Molecules:2
Biological Source:Mus musculus
Primary Citation
The crystal structure of a partial mouse Notch-1 ankyrin domain: repeats 4 through 7 preserve an ankyrin fold.
Protein Sci. 14 1274 1281 (2005)
PMID: 15802643 DOI: 10.1110/ps.041184105

Abstact

Folding and stability of proteins containing ankyrin repeats (ARs) is of great interest because they mediate numerous protein-protein interactions involved in a wide range of regulatory cellular processes. Notch, an ankyrin domain containing protein, signals by converting a transcriptional repression complex into an activation complex. The Notch ANK domain is essential for Notch function and contains seven ARs. Here, we present the 2.2 A crystal structure of ARs 4-7 from mouse Notch 1 (m1ANK). These C-terminal repeats were resistant to degradation during crystallization, and their secondary and tertiary structures are maintained in the absence of repeats 1-3. The crystallized fragment adopts a typical ankyrin fold including the poorly conserved seventh AR, as seen in the Drosophila Notch ANK domain (dANK). The structural preservation and stability of the C-terminal repeats shed a new light onto the mechanism of hetero-oligomeric assembly during Notch-mediated transcriptional activation.

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