1YKW image
Deposition Date 2005-01-18
Release Date 2005-05-17
Last Version Date 2023-08-23
Entry Detail
PDB ID:
1YKW
Title:
Crystal Structure of a Novel RuBisCO-Like Protein from the Green Sulfur Bacterium Chlorobium tepidum
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.00 Å
R-Value Free:
0.24
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
P 1 21 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:RuBisCO-like protein
Gene (Uniprot):CT1772
Mutagens:M328V
Chain IDs:A, B
Chain Length:435
Number of Molecules:2
Biological Source:Chlorobaculum tepidum
Primary Citation
Crystal structure of a RuBisCO-like protein from the green sulfur bacterium Chlorobium tepidum.
Structure 13 779 789 (2005)
PMID: 15893668 DOI: 10.1016/j.str.2005.02.017

Abstact

Ribulose 1,5-bisphosphate carboxylase/oxygenase (RuBisCO) catalyzes the incorporation of atmospheric CO(2) into ribulose 1,5-bisphosphate (RuBP). RuBisCOs are classified into four forms based on sequence similarity: forms I, II and III are bona fide RuBisCOs; form IV, also called the RuBisCO-like protein (RLP), lacks several of the substrate binding and catalytic residues and does not catalyze RuBP-dependent CO(2) fixation in vitro. To contribute to understanding the function of RLPs, we determined the crystal structure of the RLP from Chlorobium tepidum. The overall structure of the RLP is similar to the structures of the three other forms of RuBisCO; however, the active site is distinct from those of bona fide RuBisCOs and suggests that the RLP is possibly capable of catalyzing enolization but not carboxylation. Bioinformatic analysis of the protein functional linkages suggests that this RLP coevolved with enzymes of the bacteriochlorophyll biosynthesis pathway and may be involved in processes related to photosynthesis.

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Primary Citation of related structures