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1YJD image
Deposition Date 2005-01-14
Release Date 2005-02-15
Last Version Date 2024-11-13
Entry Detail
PDB ID:
1YJD
Title:
Crystal structure of human CD28 in complex with the Fab fragment of a mitogenic antibody (5.11A1)
Biological Source:
Source Organism(s):
Homo sapiens (Taxon ID: 9606)
Mus musculus (Taxon ID: 10090)
Expression System(s):
Method Details:
Experimental Method:
Resolution:
2.70 Å
R-Value Free:
0.28
R-Value Work:
0.23
R-Value Observed:
0.24
Space Group:
C 1 2 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:T-cell-specific surface glycoprotein CD28
Gene (Uniprot):CD28
Chain IDs:C
Chain Length:140
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Fab fragment of 5.11A1 antibody heavy chain
Chain IDs:B (auth: H)
Chain Length:222
Number of Molecules:1
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Molecule:Fab fragment of 5.11A1 antibody light chain
Chain IDs:A (auth: L)
Chain Length:212
Number of Molecules:1
Biological Source:Mus musculus
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
ASN C ASN GLYCOSYLATION SITE
Ligand Molecules
Primary Citation
Crystal structure of a soluble CD28-Fab complex
Nat.Immunol. 6 271 279 (2005)
PMID: 15696168 DOI: 10.1038/ni1170

Abstact

Naive T cell activation requires signaling by the T cell receptor and by nonclonotypic cell surface receptors. The most important costimulatory protein is the monovalent homodimer CD28, which interacts with CD80 and CD86 expressed on antigen-presenting cells. Here we present the crystal structure of a soluble form of CD28 in complex with the Fab fragment of a mitogenic antibody. Structural comparisons redefine the evolutionary relationships of CD28-related proteins, antigen receptors and adhesion molecules and account for the distinct ligand-binding and stoichiometric properties of CD28 and the related, inhibitory homodimer CTLA-4. Cryo-electron microscopy-based comparisons of complexes of CD28 with mitogenic and nonmitogenic antibodies place new constraints on models of antibody-induced receptor triggering. This work completes the initial structural characterization of the CD28-CTLA-4-CD80-CD86 signaling system.

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Primary Citation of related structures
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