ISDA

Deposition Date 2005-01-12

Release Date 2005-07-26

Last Version Date 2024-02-14

Entry Detail

PDB ID:

1YIM

Keywords:

HORMONE/GROWTH FACTOR RECEPTOR

Title:

Human estrogen receptor alpha ligand-binding domain in complex with compound 4

Biological Source:

Source Organism:

Homo sapiens (Taxon ID: 9606)

Host Organism:

Escherichia coli BL21(DE3)

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

1.90 Å

R-Value Free:

0.25

R-Value Observed:

0.19

Space Group:

P 65 2 2

Download Validation Report

Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Estrogen receptor
Gene (Uniprot):ESR1
Chain IDs:A
Chain Length:248
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:P03372 Pfam ID:PF00104

Ligand Molecules

CM4

Primary Citation

Estrogen receptor ligands. Part 10: Chromanes: old scaffolds for new SERAMs.

Tan, Q, Blizzard, T.A, Morgan, J.D, Birzin, E.T, Chan, W, Yang, Y.T, Pai, L.Y, Hayes, E.C, DaSilva, C.A, Warrier, S, Yudkovitz, J, Wilkinson, H.A, Sharma, N, Fitzgerald, P.M, Li, S, Colwell, L, Fisher, J.E, Adamski, S, Reszka, A.A, Kimmel, D, DiNinno, F, Rohrer, S.P, Freedman, L.P, Schaeffer, J.M, Hammond, M.L.Show

Bioorg.Med.Chem.Lett. 15 1675 1681 (2005)

PMID: 15745820 DOI: 10.1016/j.bmcl.2005.01.046

Abstact

The discovery, synthesis, and SAR of chromanes as ER alpha subtype selective ligands are described. X-ray studies revealed that the origin of the ER alpha-selectivity resulted from a C-4 trans methyl substitution to the cis-2,3-diphenyl-chromane platform. Selected compounds from this class demonstrated very potent in vivo antagonism of estradiol in an immature rat uterine weight assay, effectively inhibited ovariectomy-induced bone resorption in a 42 days treatment paradigm, and lowered serum cholesterol levels in ovx'd adult rat models. The best antagonists 8F and 12F also exhibited potent inhibition of MCF-7 cell growth and were shown to be estrogen receptor down-regulators (SERDs).

Legend

Protein

Chemical

Disease

Primary Citation of related structures