1YHD image
Deposition Date 2005-01-07
Release Date 2005-01-18
Last Version Date 2024-05-22
Entry Detail
PDB ID:
1YHD
Title:
The solution structure of YGGX from Escherichia Coli
Biological Source:
Source Organism:
Escherichia coli (Taxon ID: 562)
Host Organism:
Method Details:
Experimental Method:
Conformers Calculated:
60
Conformers Submitted:
20
Selection Criteria:
all calculated structures submitted, back calculated data agree with experimental NOESY spectrum, structures with acceptable covalent geometry, structures with favorable non-bond energy, structures with the least restraint violations, structures with the lowest energy, target function
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:UPF0269 protein yggX
Gene (Uniprot):yggX
Chain IDs:A
Chain Length:100
Number of Molecules:1
Biological Source:Escherichia coli
Ligand Molecules
Primary Citation
The solution structure of the oxidative stress-related protein YggX from Escherichia coli.
Protein Sci. 14 1673 1678 (2005)
PMID: 15883188 DOI: 10.1110/ps.051358105

Abstact

YggX is a highly conserved protein found only in eubacteria and is proposed to be involved in the bacterial response to oxidative stress. Here we report the solution structure of YggX from Escherichia coli determined by nuclear magnetic resonance spectroscopy. The structure of YggX displays a fold consisting of two N-terminal antiparallel beta-sheets and three alpha-helices, which shares significant structural similarity to the crystal structure of a hypothetical protein PA5148 from Pseudomonas aeruginosa. Previous studies propose YggX as an iron binding protein that is involved in cellular iron trafficking. Our data indicate that the protein alone does not bind iron in vitro, suggesting other cofactors or different conditions may be necessary for metal binding.

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Primary Citation of related structures