1YGZ image
Entry Detail
PDB ID:
1YGZ
Keywords:
Title:
Crystal Structure of Inorganic Pyrophosphatase from Helicobacter pylori
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2005-01-06
Release Date:
2005-11-01
Method Details:
Experimental Method:
Resolution:
2.60 Å
R-Value Free:
0.26
R-Value Work:
0.20
Space Group:
P 3
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Inorganic pyrophosphatase
Chain IDs:A, B, C, D, E, F
Chain Length:173
Number of Molecules:6
Biological Source:Helicobacter pylori
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
MSE A MET SELENOMETHIONINE
Primary Citation
Structure of inorganic pyrophosphatase from Helicobacter pylori.
Acta Crystallogr.,Sect.D 61 1459 1464 (2005)
PMID: 16239722 DOI: 10.1107/S0907444905025667

Abstact

Inorganic pyrophosphatase (PPase) is a ubiquitous cytosolic enzyme which catalyzes the hydrolysis of inorganic pyrophosphate (PPi) to orthophosphate (Pi). The crystal structure of inorganic pyrophosphatase from Helicobacter pylori (H-PPase) has been solved by MAD and refined to an R factor of 20.6% at 2.6 A resolution. The crystallographic asymmetric unit contains a homohexameric H-PPase arranged as a dimer of trimers. While most of the structural elements of PPases are highly conserved in H-PPase, some unique structural features are localized in the flexible loops near the active site, suggesting that the structural flexibility of these loops is required for the catalytic efficiency of PPase.

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Primary Citation of related structures