1YGR image
Deposition Date 2005-01-05
Release Date 2005-02-22
Last Version Date 2024-11-20
Entry Detail
PDB ID:
1YGR
Keywords:
Title:
Crystal structure of the tandem phosphatase domain of RPTP CD45
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
(Taxon ID: )
Method Details:
Experimental Method:
Resolution:
2.90 Å
R-Value Free:
0.31
R-Value Work:
0.25
R-Value Observed:
0.25
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:CD45 Protein Tyrosine Phosphatase
Gene (Uniprot):PTPRC
Mutations:C828S
Chain IDs:A, B
Chain Length:610
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:T-cell Receptor CD3 zeta ITAM-1
Gene (Uniprot):CD247
Chain IDs:C, D
Chain Length:6
Number of Molecules:2
Biological Source:
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
MSE A MET SELENOMETHIONINE
PTR C TYR O-PHOSPHOTYROSINE
Ligand Molecules
Primary Citation
Structural basis for the function and regulation of the receptor protein tyrosine phosphatase CD45.
J.Exp.Med. 201 441 452 (2005)
PMID: 15684325 DOI: 10.1084/jem.20041890

Abstact

CD45 is the prototypic member of transmembrane receptor-like protein tyrosine phosphatases (RPTPs) and has essential roles in immune functions. The cytoplasmic region of CD45, like many other RPTPs, contains two homologous protein tyrosine phosphatase domains, active domain 1 (D1) and catalytically impaired domain 2 (D2). Here, we report crystal structure of the cytoplasmic D1D2 segment of human CD45 in native and phosphotyrosyl peptide-bound forms. The tertiary structures of D1 and D2 are very similar, but doubly phosphorylated CD3zeta immunoreceptor tyrosine-based activation motif peptide binds only the D1 active site. The D2 "active site" deviates from the other active sites significantly to the extent that excludes any possibility of catalytic activity. The relative orientation of D1 and D2 is very similar to that observed in leukocyte common antigen-related protein with both active sites in an open conformation and is restrained through an extensive network of hydrophobic interactions, hydrogen bonds, and salt bridges. This crystal structure is incompatible with the wedge model previously suggested for CD45 regulation.

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Primary Citation of related structures