1YEW image
Deposition Date 2004-12-28
Release Date 2005-02-08
Last Version Date 2024-02-14
Entry Detail
PDB ID:
1YEW
Title:
Crystal structure of particulate methane monooxygenase
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.80 Å
R-Value Free:
0.30
R-Value Work:
0.27
R-Value Observed:
0.27
Space Group:
P 42 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:particulate methane monooxygenase, B subunit
Chain IDs:A, D (auth: E), G (auth: I)
Chain Length:382
Number of Molecules:3
Biological Source:Methylococcus capsulatus
Polymer Type:polypeptide(L)
Molecule:particulate methane monooxygenase, A subunit
Gene (Uniprot):pmoA1, pmoA2
Chain IDs:B, E (auth: F), H (auth: J)
Chain Length:247
Number of Molecules:3
Biological Source:Methylococcus capsulatus
Polymer Type:polypeptide(L)
Molecule:particulate methane monooxygenase subunit C2
Gene (Uniprot):pmoC2
Chain IDs:C, F (auth: G), I (auth: K)
Chain Length:289
Number of Molecules:3
Biological Source:Methylococcus capsulatus
Primary Citation
Crystal structure of a membrane-bound metalloenzyme that catalyses the biological oxidation of methane.
Nature 434 177 182 (2005)
PMID: 15674245 DOI: 10.1038/nature03311

Abstact

Particulate methane monooxygenase (pMMO) is an integral membrane metalloenzyme that catalyses the conversion of methane to methanol. Knowledge of how pMMO performs this extremely challenging chemistry may have an impact on the use of methane as an alternative energy source by facilitating the development of new synthetic catalysts. We have determined the structure of pMMO from the methanotroph Methylococcus capsulatus (Bath) to a resolution of 2.8 A. The enzyme is a trimer with an alpha3beta3gamma3 polypeptide arrangement. Two metal centres, modelled as mononuclear copper and dinuclear copper, are located in soluble regions of each pmoB subunit, which resembles cytochrome c oxidase subunit II. A third metal centre, occupied by zinc in the crystal, is located within the membrane. The structure provides new insight into the molecular details of biological methane oxidation.

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