1Y7Q image
Entry Detail
PDB ID:
1Y7Q
Keywords:
Title:
Mammalian SCAN domain dimer is a domain-swapped homologue of the HIV capsid C-terminal domain
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2004-12-09
Release Date:
2005-01-18
Method Details:
Experimental Method:
Conformers Calculated:
100
Conformers Submitted:
20
Selection Criteria:
structures with favorable non-bond energy
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Zinc finger protein 174
Mutations:P100E, P111L
Chain IDs:A, B
Chain Length:98
Number of Molecules:2
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Mammalian SCAN Domain Dimer Is a Domain-Swapped Homolog of the HIV Capsid C-Terminal Domain
Mol.Cell 17 137 143 (2005)
PMID: 15629724 DOI: 10.1016/j.molcel.2004.12.015

Abstact

Retroviral assembly is driven by multiple interactions mediated by the Gag polyprotein, the main structural component of the forming viral shell. Critical determinants of Gag oligomerization are contained within the C-terminal domain (CTD) of the capsid protein, which also harbors a conserved sequence motif, the major homology region (MHR), in the otherwise highly variable Gag. An unexpected clue about the MHR function in retroviral assembly emerges from the structure of the zinc finger-associated SCAN domain we describe here. The SCAN dimer adopts a fold almost identical to that of the retroviral capsid CTD but uses an entirely different dimerization interface caused by swapping the MHR-like element between the monomers. Mutations in retroviral capsid proteins and functional data suggest that a SCAN-like MHR-swapped CTD dimer forms during immature particle assembly. In the SCAN-like dimer, the MHR contributes the major part of the large intertwined dimer interface explaining its functional significance.

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Primary Citation of related structures