1Y3A image
Entry Detail
PDB ID:
1Y3A
Title:
Structure of G-Alpha-I1 bound to a GDP-selective peptide provides insight into guanine nucleotide exchange
Biological Source:
Source Organism:
PDB Version:
Deposition Date:
2004-11-24
Release Date:
2005-07-12
Method Details:
Experimental Method:
Resolution:
2.50 Å
R-Value Free:
0.28
R-Value Work:
0.24
R-Value Observed:
0.25
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Guanine nucleotide-binding protein G(i), alpha-1 subunit
Chain IDs:A, B, C, D
Chain Length:329
Number of Molecules:4
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:KB752 peptide
Chain IDs:E, F, G, H
Chain Length:16
Number of Molecules:4
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Structure of G-Alpha-I1 bound to a GDP-selective peptide provides insight into guanine nucleotide exchange
Structure 7 1069 1080 (2005)
PMID: 16004878 DOI: 10.1016/j.str.2005.04.007

Abstact

Heterotrimeric G proteins are molecular switches that regulate numerous signaling pathways involved in cellular physiology. This characteristic is achieved by the adoption of two principal states: an inactive, GDP bound state and an active, GTP bound state. Under basal conditions, G proteins exist in the inactive, GDP bound state; thus, nucleotide exchange is crucial to the onset of signaling. Despite our understanding of G protein signaling pathways, the mechanism of nucleotide exchange remains elusive. We employed phage display technology to identify nucleotide state-dependent Galpha binding peptides. Herein, we report a GDP-selective Galpha binding peptide, KB-752, that enhances spontaneous nucleotide exchange of Galpha(i) subunits. Structural determination of the Galpha(i1)/peptide complex reveals unique changes in the Galpha switch regions predicted to enhance nucleotide exchange by creating a GDP dissociation route. Our results cast light onto a potential mechanism by which Galpha subunits adopt a conformation suitable for nucleotide exchange.

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