1Y32 image
Deposition Date 2004-11-23
Release Date 2005-02-22
Last Version Date 2024-05-22
Entry Detail
PDB ID:
1Y32
Title:
NMR structure of humanin in 30% TFE solution
Biological Source:
Source Organism:
(Taxon ID: )
Method Details:
Experimental Method:
Conformers Calculated:
300
Conformers Submitted:
14
Selection Criteria:
structures with the lowest energy
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Humanin
Gene (Uniprot):MT-RNR2
Chain IDs:A
Chain Length:24
Number of Molecules:1
Biological Source:
Ligand Molecules
Primary Citation
Solution structure of humanin, a peptide against Alzheimer's disease-related neurotoxicity.
Biochem.Biophys.Res.Commun. 329 152 160 (2005)
PMID: 15721287 DOI: 10.1016/j.bbrc.2005.01.100

Abstact

Humanin is a newly identified 24-residue peptide that suppresses neuronal cell death caused by a wide spectrum of familial Alzheimer's disease genes and the beta-amyloid peptide. In this study, NMR and circular dichroism studies of synthetic humanin in aqueous and 30% 2,2,2-trifluoroethanol (TFE) solutions are reported. In aqueous solution, humanin exists predominantly in an unstructured conformation in equilibrium with turn-like structures involving residues Gly5 to Leu10 and Glu15 to Leu18, providing indication of nascent helix. In the less polar environment of 30% TFE, humanin readily adopts helical structure with long-range order spanning residues Gly5 to Leu18. Comparative 3D modeling studies and topology predictions are in qualitative agreement with the experimental findings in both environments. Our studies reveal a flexible peptide in aqueous environment, which is free to interact with possible receptors that mediate its action, but may also acquire a helical conformation necessary for specific interactions and/or passage through membranes.

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