1XXN image
Deposition Date 2004-11-07
Release Date 2005-10-18
Last Version Date 2023-08-23
Entry Detail
PDB ID:
1XXN
Keywords:
Title:
Crystal structure of a mesophilic xylanase A from Bacillus subtilis 1A1
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.70 Å
R-Value Free:
0.21
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
P 21 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Endo-1,4-beta-xylanase A
Gene (Uniprot):xynA
Chain IDs:A
Chain Length:185
Number of Molecules:1
Biological Source:Bacillus subtilis
Ligand Molecules
Primary Citation
Correlation of temperature induced conformation change with optimum catalytic activity in the recombinant G/11 xylanase A from Bacillus subtilis strain 168 (1A1).
Febs Lett. 579 6505 6510 (2005)
PMID: 16289057 DOI: 10.1016/j.febslet.2005.10.039

Abstact

The 1.7A resolution crystal structure of recombinant family G/11 beta-1,4-xylanase (rXynA) from Bacillus subtilis 1A1 shows a jellyroll fold in which two curved beta-sheets form the active-site and substrate-binding cleft. The onset of thermal denaturation of rXynA occurs at 328 K, in excellent agreement with the optimum catalytic temperature. Molecular dynamics simulations at temperatures of 298-328 K demonstrate that below the optimum temperature the thumb loop and palm domain adopt a closed conformation. However, at 328 K these two domains separate facilitating substrate access to the active-site pocket, thereby accounting for the optimum catalytic temperature of the rXynA.

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Primary Citation of related structures