1XS5 image
Deposition Date 2004-10-18
Release Date 2004-11-23
Last Version Date 2024-02-14
Entry Detail
PDB ID:
1XS5
Title:
The Crystal Structure of Lipoprotein Tp32 from Treponema pallidum
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.85 Å
R-Value Free:
0.23
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
P 21 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Membrane lipoprotein TpN32
Gene (Uniprot):tpn32
Chain IDs:A
Chain Length:241
Number of Molecules:1
Biological Source:Treponema pallidum
Ligand Molecules
Primary Citation
Structural evidence that the 32-kilodalton lipoprotein (Tp32) of Treponema pallidum is an L-methionine-binding protein
J.Biol.Chem. 279 55644 55650 (2004)
PMID: 15489229 DOI: 10.1074/jbc.M409263200

Abstact

A structure-to-function approach was undertaken to gain insights into the potential function of the 32-kDa membrane lipoprotein (Tp32) of Treponema pallidum, the syphilis bacterium. The crystal structure of rTp32 (determined at a resolution of 1.85 A) shows that the organization of rTp32 is similar to other periplasmic ligand-binding proteins (PLBPs), in that it consists of two alpha/beta domains, linked by two crossovers, with a binding pocket between them. In the pocket, a molecule of L-methionine was detected in the electron density map. Residues from both domains interact with the ligand. One of the crossover regions is comprised of a 3(10)-helix, a feature not typical in other ligand-binding proteins. Sequence comparison shows strong similarity to other hypothetical methionine-binding proteins. Together, the data support the notion that rTp32 is a component of a periplasmic methionine uptake transporter system in T. pallidum.

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Primary Citation of related structures