1XLM image
Entry Detail
PDB ID:
1XLM
Keywords:
Title:
D254E, D256E MUTANT OF D-XYLOSE ISOMERASE COMPLEXED WITH AL3 AND XYLITOL
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
1997-07-22
Release Date:
1998-01-28
Method Details:
Experimental Method:
Resolution:
2.40 Å
R-Value Free:
0.22
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
C 2 2 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:D-XYLOSE ISOMERASE
Mutations:D254E, D256E
Chain IDs:A, B
Chain Length:394
Number of Molecules:2
Biological Source:Arthrobacter sp. NRRL
Primary Citation
Structure determination and refinement of the Al3+ complex of the D254,256E mutant of Arthrobacter D-xylose isomerase at 2.40 A resolution. Further evidence for inhibitor-induced metal ion movement.
Int.J.Biol.Macromol. 25 329 336 (1999)
PMID: 10456773 DOI: 10.1016/S0141-8130(99)00051-3

Abstact

The structure of the D254.256E double mutant of Arthrobacter xylose isomerase with Al3+ at both metal-binding sites was determined by the molecular replacement method at a conventional R-factor of 0.179. Binding of the two Al3+ does not alter the overall structure significantly. However, there are local rearrangements in the octahedral co-ordination sphere of the Al3+. The inhibitor molecule moves somewhat away from the active site. Furthermore, evidence was revealed for metal ion movement from site 2(1) to site 2(2) upon double mutation. Xylose isomerase requires two divalent metal cations for activation. The catalytic metal ion is translocated 1.8 A away from its initial position during the catalytic reaction. The fact that both activating and inactivating metals (including Al3+) were found exclusively at a single location in the double mutant was an indication that the consequently missing shuttle may account for the crippled catalytic efficiency.

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Primary Citation of related structures