1XI4 image
Deposition Date 2004-09-21
Release Date 2004-11-02
Last Version Date 2024-03-13
Entry Detail
PDB ID:
1XI4
Title:
Clathrin D6 Coat
Biological Source:
Source Organism:
Bos taurus (Taxon ID: 9913)
Method Details:
Experimental Method:
Resolution:
7.90 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Clathrin heavy chain
Gene (Uniprot):CLTC
Chain IDs:A, B, C, G (auth: D), H (auth: E), I (auth: F), M (auth: G), N (auth: H), O (auth: I)
Chain Length:1630
Number of Molecules:9
Biological Source:Bos taurus
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Clathrin light chain A
Gene (Uniprot):CLTA
Chain IDs:D (auth: J), E (auth: K), F (auth: L), J (auth: M), K (auth: N), L (auth: O), P, Q, R
Chain Length:70
Number of Molecules:9
Biological Source:Bos taurus
Ligand Molecules
Primary Citation
Molecular model for a complete clathrin lattice from electron cryomicroscopy
Nature 432 573 579 (2004)
PMID: 15502812 DOI: 10.1038/nature03079

Abstact

Clathrin-coated vesicles are important vehicles of membrane traffic in cells. We report the structure of a clathrin lattice at subnanometre resolution, obtained from electron cryomicroscopy of coats assembled in vitro. We trace most of the 1,675-residue clathrin heavy chain by fitting known crystal structures of two segments, and homology models of the rest, into the electron microscopy density map. We also define the position of the central helical segment of the light chain. A helical tripod, the carboxy-terminal parts of three heavy chains, projects inward from the vertex of each three-legged clathrin triskelion, linking that vertex to 'ankles' of triskelions centred two vertices away. Analysis of coats with distinct diameters shows an invariant pattern of contacts in the neighbourhood of each vertex, with more variable interactions along the extended parts of the triskelion 'legs'. These invariant local interactions appear to stabilize the lattice, allowing assembly and uncoating to be controlled by events at a few specific sites.

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Primary Citation of related structures