1XI1 image
Deposition Date 2004-09-21
Release Date 2004-12-07
Last Version Date 2024-02-14
Entry Detail
PDB ID:
1XI1
Keywords:
Title:
Phi29 DNA polymerase ssDNA complex, monoclinic crystal form
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.20 Å
R-Value Free:
0.27
R-Value Work:
0.24
R-Value Observed:
0.24
Space Group:
P 1 21 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:DNA polymerase
Gene (Uniprot):2
Mutagens:D12A D66A
Chain IDs:C (auth: A), D (auth: B)
Chain Length:575
Number of Molecules:2
Biological Source:Bacillus phage phi29
Ligand Molecules
Primary Citation
Correction of X-ray intensities from single crystals containing lattice-translocation defects
Acta Crystallogr.,Sect.D 61 67 74 (2005)
PMID: 15608377 DOI: 10.1107/S0907444904026721

Abstact

In 1954, Howells and colleagues described an unusual diffraction pattern from imidazole methemoglobin crystals caused by lattice-translocation defects. In these crystals, two identical lattices coexist as a single coherent mosaic block, but are translated by a fixed vector with respect to each other. The observed structure is a weighted sum of the two identical but translated structures, one from each lattice; the observed structure factors are a weighted vector sum of the two structure factors with identical unit amplitudes but shifted phases. A general procedure is described to obtain the unit amplitudes of observed structure factors from a realigned single lattice through an X-ray intensity correction. An application of this procedure is made to determine the crystal structure of phi29 DNA polymerase at 2.2 A resolution using multiple isomorphous replacement and multiwavelength anomalous dispersion methods.

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Primary Citation of related structures
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