1XFI image
Deposition Date 2004-09-14
Release Date 2004-09-28
Last Version Date 2024-02-14
Entry Detail
PDB ID:
1XFI
Title:
X-ray structure of gene product from Arabidopsis thaliana At2g17340
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.70 Å
R-Value Free:
0.22
R-Value Work:
0.16
R-Value Observed:
0.17
Space Group:
P 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:unknown protein
Gene (Uniprot):F5J6.10
Chain IDs:A
Chain Length:367
Number of Molecules:1
Biological Source:Arabidopsis thaliana
Ligand Molecules
Primary Citation
The structure at 1.7 A resolution of the protein product of the At2g17340 gene from Arabidopsis thaliana.
Acta Crystallogr.,Sect.F 61 630 635 (2005)
PMID: 16511115 DOI: 10.1107/S1744309105017690

Abstact

The crystal structure of the At2g17340 protein from A. thaliana was determined by the multiple-wavelength anomalous diffraction method and was refined to an R factor of 16.9% (Rfree = 22.1%) at 1.7 A resolution. At2g17340 is a member of the Pfam01937.11 protein family and its structure provides the first insight into the structural organization of this family. A number of fully and highly conserved residues defined by multiple sequence alignment of members of the Pfam01937.11 family were mapped onto the structure of At2g17340. The fully conserved residues are involved in the coordination of a metal ion and in the stabilization of loops surrounding the metal site. Several additional highly conserved residues also map into the vicinity of the metal-binding site, while others are clearly involved in stabilizing the hydrophobic core of the protein. The structure of At2g17340 represents a new fold in protein conformational space.

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Primary Citation of related structures