1X9T image
Deposition Date 2004-08-24
Release Date 2005-01-18
Last Version Date 2024-04-03
Entry Detail
PDB ID:
1X9T
Title:
The crystal structure of human adenovirus 2 penton base in complex with an ad2 N-terminal fibre peptide
Biological Source:
Source Organism:
Human adenovirus 2 (Taxon ID: 10515)
(Taxon ID: )
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.50 Å
R-Value Free:
0.30
R-Value Work:
0.30
R-Value Observed:
0.30
Space Group:
C 1 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Penton protein
Gene (Uniprot):L2
Chain IDs:A
Chain Length:523
Number of Molecules:1
Biological Source:Human adenovirus 2
Polymer Type:polypeptide(L)
Molecule:N-terminal peptide of Fiber protein
Chain IDs:B
Chain Length:21
Number of Molecules:1
Biological Source:
Ligand Molecules
Primary Citation
The structure of the human adenovirus 2 penton
Mol.Cell 17 121 135 (2005)
PMID: 15629723 DOI: 10.1016/j.molcel.2004.11.041

Abstact

The adenovirus penton, a noncovalent complex of the pentameric penton base and trimeric fiber proteins, comprises the vertices of the adenovirus capsid and contains all necessary components for viral attachment and internalization. The 3.3 A resolution crystal structure of human adenovirus 2 (hAd2) penton base shows that the monomer has a basal jellyroll domain and a distal irregular domain formed by two long insertions, a similar topology to the adenovirus hexon. The Arg-Gly-Asp (RGD) motif, required for interactions with cellular integrins, occurs on a flexible surface loop. The complex of penton base with bound N-terminal fiber peptide, determined at 3.5 A resolution, shows that the universal fiber motif FNPVYPY binds at the interface of adjacent penton base monomers and results in a localized structural rearrangement in the insertion domain of the penton base. These results give insight into the structure and assembly of the adenovirus capsid and will be of use for gene-therapy applications.

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