1X89 image
Entry Detail
PDB ID:
1X89
Title:
Crystal structure of Siderocalin (NGAL, Lipocalin 2) complexed with Carboxymycobactin S
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2004-08-17
Release Date:
2005-01-25
Method Details:
Experimental Method:
Resolution:
2.10 Å
R-Value Free:
0.25
R-Value Work:
0.22
Space Group:
P 41 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Neutrophil gelatinase-associated lipocalin
Mutations:C87S
Chain IDs:A, B, C
Chain Length:178
Number of Molecules:3
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Siderocalin (Lcn 2) Also Binds Carboxymycobactins, Potentially Defending against Mycobacterial Infections through Iron Sequestration
Structure 13 29 41 (2005)
PMID: 15642259 DOI: 10.1016/j.str.2004.10.009

Abstact

Siderocalin, a member of the lipocalin family of binding proteins, is found in neutrophil granules, uterine secretions, and at markedly elevated levels in serum and synovium during bacterial infection; it is also secreted from epithelial cells in response to inflammation or tumorigenesis. Identification of high-affinity ligands, bacterial catecholate-type siderophores (such as enterochelin), suggested a possible function for siderocalin: an antibacterial agent, complementing the general antimicrobial innate immune system iron-depletion strategy, sequestering iron as ferric siderophore complexes. Supporting this hypothesis, siderocalin is a potent bacteriostatic agent in vitro under iron-limiting conditions and, when knocked out, renders mice remarkably susceptible to bacterial infection. Here we show that siderocalin also binds soluble siderophores of mycobacteria, including M. tuberculosis: carboxymycobactins. Siderocalin employs a degenerate recognition mechanism to cross react with these dissimilar types of siderophores, broadening the potential utility of this innate immune defense.

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