1WWW image
Deposition Date 1999-03-12
Release Date 1999-09-15
Last Version Date 2024-10-30
Entry Detail
PDB ID:
1WWW
Title:
NGF IN COMPLEX WITH DOMAIN 5 OF THE TRKA RECEPTOR
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.20 Å
R-Value Free:
0.26
R-Value Work:
0.18
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:PROTEIN (NERVE GROWTH FACTOR)
Gene (Uniprot):NGF
Chain IDs:A (auth: V), B (auth: W)
Chain Length:120
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:PROTEIN (TRKA RECEPTOR)
Gene (Uniprot):NTRK1
Chain IDs:C (auth: X), D (auth: Y)
Chain Length:101
Number of Molecules:2
Biological Source:Homo sapiens
Primary Citation
Crystal structure of nerve growth factor in complex with the ligand-binding domain of the TrkA receptor.
Nature 401 184 188 (1999)
PMID: 10490030 DOI: 10.1038/43705

Abstact

Nerve growth factor (NGF) is involved in a variety of processes involving signalling, such as cell differentiation and survival, growth cessation and apoptosis of neurons. These events are mediated by NGF as a result of binding to its two cell-surface receptors, TrkA and p75. TrkA is a receptor with tyrosine kinase activity that forms a high-affinity binding site for NGF. Of the five domains comprising its extracellular portion, the immunoglobulin-like domain proximal to the membrane (TrkA-d5 domain) is necessary and sufficient for NGF binding. Here we present the crystal structure of human NGF in complex with human TrkA-d5 at 2.2 A resolution. The ligand-receptor interface consists of two patches of similar size. One patch involves the central beta-sheet that forms the core of the homodimeric NGF molecule and the loops at the carboxy-terminal pole of TrkA-d5. The second patch comprises the amino-terminal residues of NGF, which adopt a helical conformation upon complex formation, packing against the 'ABED' sheet of TrkA-d5. The structure is consistent with results from mutagenesis experiments for all neurotrophins, and indicates that the first patch may constitute a conserved binding motif for all family members, whereas the second patch is specific for the interaction between NGF and TrkA.

Legend

Protein

Chemical

Disease

Primary Citation of related structures